Protein ZmMYBR56 | |
---|---|
Information | |
TF Name: | ZmMYBR56 |
Species: | Maize |
TF Family: | MYB-related |
Gene Name(Synonym): | MYBR56 |
Uniprot ID: | A0A1D6PDQ1 |
ZmMYBR56 is a protein in the MYB-related family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d007883 | DAPseq | sequence | fimo | position | |
Zm00001d007883 | DAPseq | sequence | fimo | position | |
Zm00001d007883 | ChIPseq | sequence | fimo | position | |
Zm00001d007883 | PChIPseq | sequence | fimo | position |
MHSNDPISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLKDHWVTYNREVTKFNGFYLQEERLRQSGADDAMVMDAAMA
RFEGKMGHPFKRHHWWQVVRHEPKWSAKHGLGSGSDSTANKRTRLGVSGEYSSGGTEDTEEEVPRPVGRDRAKAAARKTK
TKGKGKEATSSESTSEAFKMKNLWGGLVKAKLLKQWNILKGRSTRDMDPAERRTHGRAVKMVEKELGLLDDEEEEPEAER
EEEEDEDEIEESD
MHSNDPISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLKDHWVTYNREVTKFNGFYLQEERLRQSGADDAMVMDAAMA
RFEGKMGHPFKRHHWWQVVRHEPKWSAKHGLGSGSDSTANKRTRLGVSGEYSSGGTEDTEEEVPRPVGRDRAKAAARKTK
TKGKGKEATSSESTSEAFKMKNLWGGLVKAKLLKQWNILKGRSTRDMDPAERRTHGRAVKMVEKELGLLDDEEEEPEAER
EEEEDEDEIEESD
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
TCACTCCCCCGTGCACTATTTCCGG...
TCACTCCCCCGTGCACTATTTCCGGCTGCGCGTCCACCACCATACCCTTATCCCTATCATTTGTATCAATATCCACCGTCTTCATATGGTCAACCTCCAACTTCCCAAGCCGGAATTCAAGCCTCATTCCCGGTACGTCCGTATGCCCCTCCTCCACCTGCTGCGGACGGAAGTCAAGCTTCTTTCCAGATACCTCCATACGCCCCTCCTTCATATGCTCCACCTCCGTATGGAGTACCTCCTTATGCTCCATATGCTCCACCTCCGTATGGGGCACCTCATCCATATGCTCCACCTACGTATGGAGCACCTCCTCCAGTTGCACCTTTATCTGTTGGATCTGAGAACCAAGCTGAGGAAAATCCCGTGCCGAAGGAAAAGCGTCCAAAGAGGCTAGAGTGGACGAAGGAAGACGAGGAAAAGCTGGTTAATGCTTGGTTTATGCATTCTAATGATCCCATCTCCGGCAACAATAAGAGCGGATCAAGTTTCTGGGGCCAAATAGCGGCAACATATAACTCCACCTCCGACCCTATCCGTCATCGAACCGCCAAGCAACTTAAAGATCATTGGGTCACCTACAACCGGGAGGTGACCAAGTTCAATGGATTCTACCTCCAAGAAGAAAGGTTGCGTCAGAGCGGAGCTGACGATGCAATGGTCATGGATGCAGCAATGGCGAGGTTCGAGGGTAAAATGGGGCATCCATTTAAGCGCCATCATTGGTGGCAAGTTGTTCGCCACGAGCCCAAGTGGTCAGCAAAGCATGGTCTTGGTAGTGGATCTGATTCGACTGCGAATAAGAGAACCCGACTCGGAGTCTCTGGTGAATATAGTTCTGGAGGCACTGAAGACACCGAGGAGGAAGTGCCCCGACCAGTGGGGCGTGATAGGGCAAAGGCGGCTGCGCGAAAGACAAAGACGAAGGGGAAAGGGAAGGAAGCCACGAGCAGCGAATCAACAAGTGAAGCATTCAAAATGAAGAACTTGTGGGGTGGATTAGTGAAGGCCAAGCTTTTGAAGCAATGGAACATCCTAAAGGGCCGATCAACCAGAGATATGGACCCGGCTGAAAGACGTACCCATGGCAGGGCCGTAAAGATGGTCGAAAAAGAACTTGGTCTGCTAGATGACGAAGAAGAGGAACCGGAAGCGGAACGTGAAGAGGAGGAAGATGAGGATGAGATCGAGGAGTCCGATTAGAGTTATGTAATTTTATTTTAATT
MSGWSPDLNTFTDLLQSDGSPTTLPLDESSSLHRRSDVSASLPRALFPAARPPPYPYPYHLYQYPPSSYGQPPTSQAGIQ
ASFPVRPYAPPPPAADGSQASFQIPPYAPPSYAPPPYGVPPYAPYAPPPYGAPHPYAPPTYGAPPPVAPLSVGSENQAEE
NPVPKEKRPKRLEWTKEDEEKLVNAWFMHSNDPISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLKDHWVTYNREVTK
FNGFYLQEERLRQSGADDAMVMDAAMARFEGKMGHPFKRHHWWQVVRHEPKWSAKHGLGSGSDSTANKRTRLGVSGEYSS
GGTEDTEEEVPRPVGRDRAKAAARKTKTKGKGKEATSSESTSEAFKMKNLWGGLVKAKLLKQWNILKGRSTRDMDPAERR
THGRAVKMVEKELGLLDDEEEEPEAEREEEEDEDEIEESD
ATGTCGGGTTGGTCCCCAGATTTGA...
ATGTCGGGTTGGTCCCCAGATTTGAACACCTTCACGGATCTCTTGCAGTCCGATGGGTCACCTACAACCCTTCCGTTAGATGAGTCTTCTTCACTACATCGTCGCTCCGATGTTTCAGCCTCACTCCCCCGTGCACTATTTCCGGCTGCGCGTCCACCACCATACCCTTATCCCTATCATTTGTATCAATATCCACCGTCTTCATATGGTCAACCTCCAACTTCCCAAGCCGGAATTCAAGCCTCATTCCCGGTACGTCCGTATGCCCCTCCTCCACCTGCTGCGGACGGAAGTCAAGCTTCTTTCCAGATACCTCCATACGCCCCTCCTTCATATGCTCCACCTCCGTATGGAGTACCTCCTTATGCTCCATATGCTCCACCTCCGTATGGGGCACCTCATCCATATGCTCCACCTACGTATGGAGCACCTCCTCCAGTTGCACCTTTATCTGTTGGATCTGAGAACCAAGCTGAGGAAAATCCCGTGCCGAAGGAAAAGCGTCCAAAGAGGCTAGAGTGGACGAAGGAAGACGAGGAAAAGCTGGTTAATGCTTGGTTTATGCATTCTAATGATCCCATCTCCGGCAACAATAAGAGCGGATCAAGTTTCTGGGGCCAAATAGCGGCAACATATAACTCCACCTCCGACCCTATCCGTCATCGAACCGCCAAGCAACTTAAAGATCATTGGGTCACCTACAACCGGGAGGTGACCAAGTTCAATGGATTCTACCTCCAAGAAGAAAGGTTGCGTCAGAGCGGAGCTGACGATGCAATGGTCATGGATGCAGCAATGGCGAGGTTCGAGGGTAAAATGGGGCATCCATTTAAGCGCCATCATTGGTGGCAAGTTGTTCGCCACGAGCCCAAGTGGTCAGCAAAGCATGGTCTTGGTAGTGGATCTGATTCGACTGCGAATAAGAGAACCCGACTCGGAGTCTCTGGTGAATATAGTTCTGGAGGCACTGAAGACACCGAGGAGGAAGTGCCCCGACCAGTGGGGCGTGATAGGGCAAAGGCGGCTGCGCGAAAGACAAAGACGAAGGGGAAAGGGAAGGAAGCCACGAGCAGCGAATCAACAAGTGAAGCATTCAAAATGAAGAACTTGTGGGGTGGATTAGTGAAGGCCAAGCTTTTGAAGCAATGGAACATCCTAAAGGGCCGATCAACCAGAGATATGGACCCGGCTGAAAGACGTACCCATGGCAGGGCCGTAAAGATGGTCGAAAAAGAACTTGGTCTGCTAGATGACGAAGAAGAGGAACCGGAAGCGGAACGTGAAGAGGAGGAAGATGAGGATGAGATCGAGGAGTCCGATTAGAGTTATGTAATTTTATTTTAATTATCATGTCATTTTATTTTAATTATTATGTATTTTGTAATTTTTAATTCAATAAAAAATATTATGTTGTGTGTTTTCTGAGCGTTGAAATAAATCCGCGTGAATTACTTAATTCTGAAAT
MVMDAAMARFEGKMGHPFKRHHWWQVVRHEPKWSAKHGLGSGSDSTANKRTRLGVSGEYSSGGTEDTEEEVPRPVGRDRA
KAAARKTKTKGKGKEATSSESTSEAFKMKNLWGGLVKAKLLKQWNILKGRSTRDMDPAERRTHGRAVKMVEKELGLLDDE
EEEPEAEREEEEDEDEIEESD
CCCTATCCGTCATCGAACCGCCAAG...
CCCTATCCGTCATCGAACCGCCAAGCAACTTAAAGATCATTGGGTCACCTACAACCGGGAGGTGACCAAGTTCAATGGATTCTACCTCCAAGAAGAAAGGTTGCGTCAGAGCGGAGCTGACGATGCAATGGTCATGGATGCAGCAATGGCGAGGTTCGAGGGTAAAATGGGGCATCCATTTAAGCGCCATCATTGGTGGCAAGTTGTTCGCCACGAGCCCAAGTGGTCAGCAAAGCATGGTCTTGGTAGTGGATCTGATTCGACTGCGAATAAGAGAACCCGACTCGGAGTCTCTGGTGAATATAGTTCTGGAGGCACTGAAGACACCGAGGAGGAAGTGCCCCGACCAGTGGGGCGTGATAGGGCAAAGGCGGCTGCGCGAAAGACAAAGACGAAGGGGAAAGGGAAGGAAGCCACGAGCAGCGAATCAACAAGTGAAGCATTCAAAATGAAGAACTTGTGGGGTGGATTAGTGAAGGCCAAGCTTTTGAAGCAATGGAACATCCTAAAGGGCCGATCAACCAGAGATATGGACCCGGCTGAAAGACGTACCCATGGCAGGGCCGTAAAGATGGTCGAAAAAGAACTTGGTCTGCTAGATGACGAAGAAGAGGAACCGGAAGCGGAACGTGAAGAGGAGGAAGATGAGGATGAGATCGAGGAGTCCGATTAGAGTTATGTAATTTTATTTTAATTATCA
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