Protein ZmMYBR56
ZmMYBR56 is a protein in the MYB-related family.
Information
TF Name: ZmMYBR56
Species: Maize
TF Family: MYB-related
Gene Name(Synonym): MYBR56
Uniprot ID: A0A1D6PDQ1

Protein ZmMYBR56

ZmMYBR56 is a protein in the MYB-related family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d007883DAPseq no logo sequence fimo position
Zm00001d007883DAPseq no logo sequence fimo position
Zm00001d007883ChIPseq no logo sequence fimo position
Zm00001d007883PChIPseq no logo sequence fimo position

Interactions where ZmMYBR56 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmMYBR56 is the target  
Expand


There are 3 protein-dna interactions that fit this criteria. download excel sheet

Zm00001d007883_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MHSNDPISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLKDHWVTYNREVTKFNGFYLQEERLRQSGADDAMVMDAAMA
RFEGKMGHPFKRHHWWQVVRHEPKWSAKHGLGSGSDSTANKRTRLGVSGEYSSGGTEDTEEEVPRPVGRDRAKAAARKTK
TKGKGKEATSSESTSEAFKMKNLWGGLVKAKLLKQWNILKGRSTRDMDPAERRTHGRAVKMVEKELGLLDDEEEEPEAER
EEEEDEDEIEESD

MHSNDPISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLKDHWVTYNREVTKFNGFYLQEERLRQSGADDAMVMDAAMA
RFEGKMGHPFKRHHWWQVVRHEPKWSAKHGLGSGSDSTANKRTRLGVSGEYSSGGTEDTEEEVPRPVGRDRAKAAARKTK
TKGKGKEATSSESTSEAFKMKNLWGGLVKAKLLKQWNILKGRSTRDMDPAERRTHGRAVKMVEKELGLLDDEEEEPEAER
EEEEDEDEIEESD

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available

Nucleotide Sequence
Copy to clipboard
     
Expand

TCACTCCCCCGTGCACTATTTCCGG...

GRMZM2G398758_T01 from maize genome v3


Related TFome: pUT4206

Amino Acid Sequence
Copy to clipboard

MSGWSPDLNTFTDLLQSDGSPTTLPLDESSSLHRRSDVSASLPRALFPAARPPPYPYPYHLYQYPPSSYGQPPTSQAGIQ
ASFPVRPYAPPPPAADGSQASFQIPPYAPPSYAPPPYGVPPYAPYAPPPYGAPHPYAPPTYGAPPPVAPLSVGSENQAEE
NPVPKEKRPKRLEWTKEDEEKLVNAWFMHSNDPISGNNKSGSSFWGQIAATYNSTSDPIRHRTAKQLKDHWVTYNREVTK
FNGFYLQEERLRQSGADDAMVMDAAMARFEGKMGHPFKRHHWWQVVRHEPKWSAKHGLGSGSDSTANKRTRLGVSGEYSS
GGTEDTEEEVPRPVGRDRAKAAARKTKTKGKGKEATSSESTSEAFKMKNLWGGLVKAKLLKQWNILKGRSTRDMDPAERR
THGRAVKMVEKELGLLDDEEEEPEAEREEEEDEDEIEESD

Nucleotide Sequence
Copy to clipboard
     
Expand

ATGTCGGGTTGGTCCCCAGATTTGA...

Zm00001eb117440_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MVMDAAMARFEGKMGHPFKRHHWWQVVRHEPKWSAKHGLGSGSDSTANKRTRLGVSGEYSSGGTEDTEEEVPRPVGRDRA
KAAARKTKTKGKGKEATSSESTSEAFKMKNLWGGLVKAKLLKQWNILKGRSTRDMDPAERRTHGRAVKMVEKELGLLDDE
EEEPEAEREEEEDEDEIEESD

Nucleotide Sequence
Copy to clipboard
     
Expand

CCCTATCCGTCATCGAACCGCCAAG...


Copyright © 2023 Grassius.org | Last updated: 2023-06-26